Neuro-Electronics Research Flanders

Publications

  • Lee WC, Bonin V, Reed M, Graham BJ, Hood G, Glattfelder K, Reid RC, “Anatomy and function of an excitatory network in the visual cortex”, Nature, (2016)
  • Welkenhuysen M, Hoffman L, Luo Z, De Proft A, Van den Haute C, Baekelandt V, Debyser Z, Gielen G, Puers R, Braeken D, “An integrated multi-electrode-optrode array for in vitro optogenetics”, Scientific Reports, 6:20353, (2016)
  • Gomperts SN, Kloosterman F, Wilson MA, “VTA neurons coordinate with the hippocampal reactivation of spatial experience”, eLife, 4, (2015)
  • Jones IL, Russell TL, Farrow K, Fiscella M, Franke F, Müller J, Jäckel D and Hierlemann A, “A method for electrophysiological characterization of hamster retinal ganglion cells using a high-density CMOS microelectrode array”, Frontiers in Neuroscience, Volume 9, Article 360, (2015)
  • Sodkomkham D, Ciliberti D, Wilson MA, Fukui K, Moriyama K, Numao M, Kloosterman F, “Kernel density compression for real-time Bayesian encoding/decoding of unsorted hippocampal spikes”, Knowledge-Based Systems, (2015)
  • L Hoffman, M Welkenhuysen, A Andrei, S Musa, Z Luo, S Libbrecht, S Severi, P Soussan, V Baekelandt, S Haesler, G Gielen, R Puers, D Braeken, “High density optrode-electrode neural probe using SixNy photonics for in vivo optogenetics.”, IEEE International Electron Devices Meeting 2015, (2015)
  • Fiscella M, Franke F, Farrow K, Müller J, Roska B, Azeredo da Silveira R, Hierlemann A, “Visual coding with a population of direction-selective neurons”, Journal of Neurophysiology, 114(4):2485-2499, (2015)
  • Zhang J, Mitra S, Suo Y, Cheng A, Xiong T, Michon F, Welkenhuysen M, Kloosterman F, Chin PS, Hsiao S, Tran TD, Yazicioglu F and Etienne-Cummings R, “A closed-loop compressive-sensing-based neural recording system”, Journal of Neural Engineering, 12(3):036005, (2015)
  • Battaglia FP, Borensztajn G, Bod R, “Structured cognition and neural systems: from rats to language”, Neuroscience and Biobehavioral Reviews, 36(7):1626-39, (2015)
  • Genzel L, Kroes MC, Dresler M, Battaglia FP, “Light sleep versus slow wave sleep in memory consolidation: a question of global versus local processes?”, Trends in Neurosciences, 37(1):10-9, (2015)
  • Szikra T, Trenholm S, Drinnenberg A, Jüttner J, Raics Z, Farrow K, Biel M, Awatramani G, Clark DA, Sahel JA, da Silveira RA, Roska B, “Rods in daylight act as relay cells for cone-driven horizontal cell-mediated surround inhibition”, Nature Neuroscience, 17(12):1728-35, (2014)
  • Christiaens JF† Franco LM†, Cools T, De Meester L, Michiels J, Wenseleers T, Hassan BA, YaksiE* and Verstrepen KJ,* († Equal Contributions,* co-last corresponding authors), “The Fungal Aroma Gene ATF1 Promotes Dispersal of Yeast Cells through Insect Vectors”, Cell Reports, 9(2):425-32, (2014)
  • Goldey GJ, Roumis DK, Glickfeld LL, Kerlin AM, Reid RC, Bonin V, Schafer DP and Andermann ML, “Removable cranial windows for long-term imaging in awake mice”, Nature Protocols, 9, 2515–2538, (2014)
  • Hüsken U, Stickney HL , GestriG, Bianco IH, Faro A, Young RM, Roussigne M, Hawkins TA, Beretta CA, Brinkmann I, Paolini A, Jacinto R, Albadri S, Dreosti E, Tsalavouta M, Schwarz Q, Cavodeassi F, Barth AK, Wen L, Zhang B, Blader P, Yaksi E, Poggi L, Zigman M, Lin S, Wilson SW, Carl M, “Tcf7l2 is required for left-right asymmetric differentiation of habenular neurons”, Current Biology, 24(19):2217-27, (2014)
  • Yazicioglu F, Lopez CM, Mitra S, Raducanu B, Musa S and Kloosterman F, “Ultra-high-density in-vivo neural probes”, Conf Proc IEEE Eng Med Biol Soc., 2014:2032-5, (2014)
  • Busskamp V, Krol J, Nelidova D, Daum J, Szikra T, Tsuda B, Jüttner J, Farrow K, Scherf BG, Alvarez CP, Genoud C, Sothilingam V, Tanimoto N, Stadler M, Seeliger M, Stoffel M, Filipowicz W, Roska B, “miRNAs 182 and 183 are necessary to maintain adult cone photoreceptor outer segments and visual function”, Neuron, 83(3):586-600, (2014)
  • Nguyen TK, Navratilova Z, Cabral H, Wang L, Gielen G, Battaglia FP, Bartic C, “Closed-loop optical neural stimulation based on a 32-channel low-noise recording system with online spike sorting”, Journal of Neural Engineering, 11(4):046005, (2014)
  • Dreosti E, Vendrell Llopis N, Carl M, Yaksi E, Wilson SW, “Left-Right Asymmetry Is Required for the Habenulae to Respond to Both Visual and Olfactory Stimuli”, Current Biology, S0960-9822(14)00017-7, (2014)
  • Jetti SK, Vendrell-Llopis N, Yaksi E, “Spontaneous Activity Governs Olfactory Representations in Spatially Organized Habenular Microcircuits.”, Current Biology, 24, 1–6, (2014)
  • Kloosterman F, Layton SP, Chen Z, Wilson MA, “Bayesian decoding using unsorted spikes in the rat hippocampus”, Journal of Neurophysiology, 111(1):217-27, (2014)
  • Cabral HO, Vinck M, Fouquet C, Pennartz CM, Rondi-Reig L, Battaglia FP, “Oscillatory dynamics and place field maps reflect hippocampal ensemble processing of sequence and place memory under NMDA receptor control”, Neuron, 81(2):402-15, (2014)
  • Niell CM, Bonin V, Andermann ML, “Functional organization of circuits in the rodent primary visual cortex”, in The New Visual Neurosciences. Werner JS, Chalupa LM, editors., Cambridge, MA: The MIT Press; pp 409-424., (2013)
  • Yonehara K*, Farrow K*, Ghanem A, Hillier D, Balint K, Teixeira M, Jüttner J, Noda M, Neve RL, Conzelmann KK, Roska B, “The first stage of cardinal direction selectivity is localized to the dendrites of retinal ganglion cells”, Neuron, 79:1078-1085, (2013)
  • Farrow K, Teixeira M, Szikra T, Viney TJ, Balint K, Yonehara K, Roska B , “Ambient illumination toggles a neuronal circuit switch in the retina and visual perception at cone threshold.”, Neuron, 78: 325-338, (2013)
  • Espuny-Camacho I, Michelsen KA, Gall D, Linaro D, Hasche A, Bonnefont J, Bali C, Orduz D, Bilheu A, Herpoel A, Lambert N, Gaspard N, Péron S, Schiffmann SN, Giugliano M, Gaillard A, Vanderhaeghen P., “Pyramidal neurons derived from human pluripotent stem cells integrate efficiently into mouse brain circuits in vivo.”, Neuron, 77(3):440-56, (2013)
  • Glickfeld LL, Andermann ML, Bonin V, Reid RC, “Cortico-cortical projections in mouse visual cortex are functionally target specific”, Nature Neuroscience, 16(2):219-26, (2013)
  • Fiscella M, Farrow K, Jones IL, Jackel D, Muller J, Frey U, Bakkum DJ, Roska B, Hierlemann A, “Recording from defined populations of retinal ganglion cells using a high-density CMOS-integrated microelectrode array with real-time switchable electrode selection”, Journal of Neuroscience Methods, 211(1):103-13, (2012)
  • Chen Z, Kloosterman F, Brown EN, Wilson MA, “Uncovering spatial topology represented by rat hippocampal population neuronal codes”, Journal of Computational Neuroscience, Volume 33, Issue 2, pp 227-255, (2012)
  • Chen Z, Kloosterman F, Layton S, Wilson MA, “Transductive Neural Decoding for Unsorted Neuronal Spikes of Rat Hippocampus”, Conf Proc IEEE Eng Med Biol Soc., 2012: 1310–1313, (2012)
  • Bonin V, Histed MH, Yurgenson S, Reid RC, “Local diversity and fine-scale organization of receptive fields in mouse visual cortex”, The Journal of Neuroscience, 31(50):18506-21, (2011)
  • Kloosterman F, “Analysis of Hippocampal Memory Replay Using Neural Population Decoding”, Neuronal Network Analysis, pp 259-282, (2011)
  • Peyrache A, Battaglia FP, Destexhe A , “Inhibition recruitment in prefrontal cortex during sleep spindles and gating of hippocampal inputs”, Proc Natl Acad Sci U S A. , 108(41):17207-12., (2011)
  • Battaglia FP, Pennartz CM , “The construction of semantic memory: grammar-based representations learned from relational episodic information”, Frontiers in Computational Neuroscience, 5:36., (2011)
  • Battaglia FP, Benchenane K, Sirota A, Pennartz CM, Wiener SI, “The hippocampus: hub of brain network communication for memory”, Trends in Cognitive Sciences, 15(7):310-8, (2011)
  • Benchenane K, Tiesinga PH, Battaglia FP , “Oscillations in the prefrontal cortex: a gateway to memory and attention”, Current Opinion in Neurobiology, 21(3):475-85, (2011)
  • Farrow K and Masland RH, “Physiological clustering of visual channels in the mouse retina”, Journal of Neurophysiology, 105(4):1516-30, (2011)
  • Linaro D, Storace M, Giugliano M, “Accurate and fast simulation of channel noise in conductance-based model neurons by diffusion approximation”, PLoS Computational Biology, 7(3):e1001102., (2011)
  • Alme CB, Buzzetti RA, Marrone DF, Leutgeb JK, Chawla MK, Schaner MJ, Bohanick JD, Khoboko T, Leutgeb S, Moser EI, Moser MB, McNaughton BL, Barnes CA., “Hippocampal Granule Cells Opt for Early Retirement.”, Hippocampus., 20(10):1109-23., (2010)
  • Benchenane K, Peyrache A, Khamassi M, Tierney PL, Gioanni Y, Battaglia FP, Wiener SI , “Coherent theta oscillations and reorganization of spike timing in the hippocampal- prefrontal network upon learning”, Neuron, 66(6):921-36, (2010)
  • Cellot G, Cilia E, Cipollone S, Rancic V, Sucapane A, Giordani S, Gambazzi L, Markram H, Grandolfo M, Scaini D, Gelain F, Casalis L, Prato M, Giugliano M, Ballerini L., “Carbon nanotubes might improve neuronal performance by favouring electrical shortcuts.”, Nat Nanotechnol., 4(2):126-33., (2009)
  • Kubasak MD, Jindrich DL, Zhong H, Takeoka A, McFarland KC, Muñoz-Quiles C, Roy RR, Edgerton VR, Ramón-Cueto A, Phelps PE, “Numerous treatment strategies for spinal cord injury seek to maximize recovery of function and two strategies that show substantial promise are olfactory bulb-derived olfactory ensheathing glia (OEG) transplantation and treadmill step training. In th”, Brain, 1, (1970)
  • Kubasak MD, Jindrich DL, Zhong H, Takeoka A, McFarland KC, Muñoz-Quiles C, Roy RR, Edgerton VR, Ramón-Cueto A, Phelps PE, “OEG implantation and step training enhance hindlimb-stepping ability in adult spinal transected rats”, Brain, 1
  • Ziegler MD, Hsu D, Takeoka A,¬ Zhong H, Ramon-Cueto A, Phelps PE, Roy RR, and Edgerton VR, “Further evidence of olfactory ensheathing glia facilitating axonal regeneration after a complete spinal cord transection”, Experimental Neurology, 1